Transcript: Runx3-001 OTTMUST00000079034.1

Description

runt related transcription factor 3

Location

About this transcript

This transcript has 6 exons and is annotated with 19 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt
Runx3-001	OTTMUST00000079034.1	3884	423aa	OTTMUSP00000042120	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS18782	Q3U1Q3
Runx3-002	OTTMUST00000079035.1	1855	409aa	OTTMUSP00000042121	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	Q64131
Runx3-005	OTTMUST00000079038.1	372	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Runx3-006	OTTMUST00000079039.1	353	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Runx3-004	OTTMUST00000079037.1	227	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Runx3-003	OTTMUST00000079036.1	447	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 6 Transcript length: 3,884 bps Translation length: 423 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS18782

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 15/11/2012 (Created on 11/03/2008)

Alternative symbols

RP23-167O21.1-001

Remarks

NP_062706.2

There are a number of SNPs that mean that the Swissprot is not 100%. However, there is only one match to this cDNA in the genome

Other assemblies

This transcript maps to 135,120,652-135,177,990 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000056977

Curation Method

Manual annotation from Havana