Transcript: Gnptab-002 OTTMUST00000079167.1

Description

N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits

Location

Chromosome 10: 88,379,224-88,447,320 forward strand.

About this transcript

This transcript has 20 exons and is annotated with 3 domains and features.

Gene

This transcript is a product of gene OTTMUSG00000031924 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Gnptab-001	OTTMUST00000079166.2	5390	1235aa	OTTMUSP00000042189	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS24110	Q69ZN6
Gnptab-005	OTTMUST00000079206.7	686	174aa	OTTMUSP00000042215	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
Gnptab-006	OTTMUST00000079207.2	569	166aa	OTTMUSP00000042216	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	D3YXC6	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
Gnptab-003	OTTMUST00000079204.1	4683	No protein	-	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-	-
Gnptab-002	OTTMUST00000079167.1	5297	56aa	OTTMUSP00000042190	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	D6RJ30
Gnptab-004	OTTMUST00000079205.1	1856	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Gnptab-008	OTTMUST00000079209.1	726	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Gnptab-007	OTTMUST00000079208.1	536	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 20 Transcript length: 5,297 bps Translation length: 56 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 30/04/2012 (Created on 13/03/2008)

Alternative symbols

RP23-21G7.3-002

Other assemblies

This transcript maps to 88,379,224-88,447,320 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000151273

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: Gnptab-002 OTTMUST00000079167.1

Summary

Transcript-based displays