Transcript: Arhgef11-006 OTTMUST00000150637.1

Description

Rho guanine nucleotide exchange factor (GEF) 11

Location

About this transcript

This transcript has 8 exons and is annotated with 9 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Arhgef11-001	OTTMUST00000079227.1	6776	1552aa	OTTMUSP00000042231	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS38472	Q68FM7
Arhgef11-002	OTTMUST00000079228.2	5603	1475aa	OTTMUSP00000042232	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	E9Q0A3	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
Arhgef11-006	OTTMUST00000150637.1	615	205aa	OTTMUSP00000078106	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
Arhgef11-003	OTTMUST00000079229.1	6124	608aa	OTTMUSP00000042233	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	D6RGQ8
Arhgef11-005	OTTMUST00000079231.1	3584	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Arhgef11-004	OTTMUST00000079230.1	2408	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 8 Transcript length: 615 bps Translation length: 205 residues

Class

Novel protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 09/02/2016 (Created on 09/02/2016)

Alternative symbols

AC161454.2-006

Annotation Attributes

RNA-Seq supported only [Definitions]

Remarks

CDS end not found

mRNA end not found

Other assemblies

This transcript maps to 87,618,761-87,688,850 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000212015

Curation Method

Manual annotation from Havana