Transcript: Chtf18-002 OTTMUST00000092002.1

Description

CTF18, chromosome transmission fidelity factor 18 homolog (S. cerevisiae)

Location

Chromosome 17: 25,718,926-25,727,371 reverse strand.

About this transcript

This transcript has 21 exons and is annotated with 12 domains and features.

Gene

This transcript is a product of gene OTTMUSG00000035879 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Chtf18-001	OTTMUST00000092003.1	3214	969aa	OTTMUSP00000050754	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS28523	A0A0R4J0I4
Chtf18-004	OTTMUST00000092008.2	875	267aa	OTTMUSP00000050757	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
Chtf18-007	OTTMUST00000092005.1	442	130aa	OTTMUSP00000050755	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Chtf18-006	OTTMUST00000092006.1	430	109aa	OTTMUSP00000050756	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Chtf18-002	OTTMUST00000092002.1	3421	365aa	OTTMUSP00000050753	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
Chtf18-003	OTTMUST00000092004.1	3812	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Chtf18-005	OTTMUST00000092007.1	537	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 21 Transcript length: 3,421 bps Translation length: 365 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 10/03/2012 (Created on 29/04/2010)

Alternative symbols

RP23-377L13.4-002

Other assemblies

This transcript maps to 25,718,926-25,727,371 in GRCm38 (Ensembl) coordinates.

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Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000170575

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: Chtf18-002 OTTMUST00000092002.1

Summary

Transcript-based displays