Transcript: Plxnc1-001 OTTMUST00000112367.2

Description

plexin C1

Location

About this transcript

This transcript has 31 exons and is annotated with 32 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Plxnc1-001	OTTMUST00000112367.2	7302	1574aa	OTTMUSP00000063082	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS48676	Q9QZC2
Plxnc1-003	OTTMUST00000112369.1	716	101aa	OTTMUSP00000063083	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Plxnc1-005	OTTMUST00000156370.1	352	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Plxnc1-002	OTTMUST00000112368.1	686	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Plxnc1-004	OTTMUST00000112370.1	669	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 31 Transcript length: 7,302 bps Translation length: 1,574 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS48676

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 02/08/2016 (Created on 10/05/2012)

Alternative symbols

RP23-137B10.1-001

Other assemblies

This transcript maps to 94,790,866-94,944,835 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000099337

Curation Method

Manual annotation from Havana