Transcript: Plxnc1-003 OTTMUST00000112369.1

Description

plexin C1

Location

About this transcript

This transcript has 6 exons.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Plxnc1-001	OTTMUST00000112367.2	7302	1574aa	OTTMUSP00000063082	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS48676	Q9QZC2
Plxnc1-003	OTTMUST00000112369.1	716	101aa	OTTMUSP00000063083	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Plxnc1-005	OTTMUST00000156370.1	352	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Plxnc1-002	OTTMUST00000112368.1	686	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Plxnc1-004	OTTMUST00000112370.1	669	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 6 Transcript length: 716 bps Translation length: 101 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 10/05/2012 (Created on 10/05/2012)

Alternative symbols

RP23-137B10.1-003

Remarks

CDS start not found

mRNA start not found

Other assemblies

This transcript maps to 94,854,452-94,871,048 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000181244

Curation Method

Manual annotation from Havana