Transcript: Epha4-002 OTTMUST00000123012.1

Description

Eph receptor A4

Location

About this transcript

This transcript has 18 exons and is annotated with 47 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Epha4-001	OTTMUST00000123013.1	3612	986aa	OTTMUSP00000067293	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS35627	Q03137
Epha4-006	OTTMUST00000123014.1	614	117aa	OTTMUSP00000067294	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	A0A087WRH4	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Epha4-005	OTTMUST00000123017.2	584	177aa	OTTMUSP00000067296	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	A0A087WQW6	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
Epha4-002	OTTMUST00000123012.1	6315	986aa	OTTMUSP00000067292	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	CCDS35627	Q03137
Epha4-003	OTTMUST00000123015.1	3043	38aa	OTTMUSP00000067295	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	A0A087WQZ6
Epha4-004	OTTMUST00000123016.1	3466	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 18 Transcript length: 6,315 bps Translation length: 986 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS35627

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 24/01/2014 (Created on 24/01/2014)

Alternative symbols

RP23-59P14.2-002

Other assemblies

This transcript maps to 77,367,189-77,515,079 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000188952

Curation Method

Manual annotation from Havana