Description
phytanoyl-CoA dioxygenase domain containing 1
Location
Chromosome 2: 30,266,203-30,282,148 forward strand.
About this gene
This gene has 12 transcripts (splice variants).
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| Phyhd1-001 | OTTMUST00000040659.2 | 1678 | 291aa | OTTMUSP00000018172 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS57163 | Q9DB26 | |
| Phyhd1-002 | OTTMUST00000040694.1 | 1325 | 291aa | OTTMUSP00000018192 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS57163 | Q9DB26 | |
| Phyhd1-004 | OTTMUST00000040696.1 | 1195 | 270aa | OTTMUSP00000018193 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS57164 | - | |
| Phyhd1-005 | OTTMUST00000040697.2 | 783 | 249aa | OTTMUSP00000018194 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| Phyhd1-006 | OTTMUST00000040698.2 | 751 | 220aa | OTTMUSP00000018195 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| Phyhd1-007 | OTTMUST00000040699.2 | 720 | 222aa | OTTMUSP00000018196 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| Phyhd1-011 | OTTMUST00000083724.1 | 1390 | 180aa | OTTMUSP00000045022 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| Phyhd1-010 | OTTMUST00000063693.2 | 1183 | 159aa | OTTMUSP00000038634 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| Phyhd1-012 | OTTMUST00000083725.1 | 746 | 54aa | OTTMUSP00000045023 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| Phyhd1-003 | OTTMUST00000040695.3 | 460 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| Phyhd1-008 | OTTMUST00000040700.1 | 782 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| Phyhd1-009 | OTTMUST00000040701.1 | 746 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
