Transcript: Col20a1-001 OTTMUST00000039508.2

Description

collagen, type XX, alpha 1

Location

About this transcript

This transcript has 36 exons and is annotated with 53 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Col20a1-001	OTTMUST00000039508.2	4189	1320aa	OTTMUSP00000017651	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS50844	Q923P0
Col20a1-002	OTTMUST00000039509.3	3867	1288aa	OTTMUSP00000017652	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-
Col20a1-004	OTTMUST00000039511.1	633	135aa	OTTMUSP00000017654	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Col20a1-003	OTTMUST00000039512.2	441	79aa	OTTMUSP00000017655	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Summary

Statistics

Exons: 36 Transcript length: 4,189 bps Translation length: 1,320 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS50844

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 10/03/2012 (Created on 24/03/2006)

Alternative symbols

RP23-397H18.4-001

Remarks

NP_082794

Other assemblies

This transcript maps to 180,986,535-181,017,540 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000108856

Curation Method

Manual annotation from Havana