Transcript: Rbm48-005 OTTMUST00000104227.1

Description

RNA binding motif protein 48

Location

About this transcript

This transcript has 4 exons.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Rbm48-001	OTTMUST00000070734.2	2368	413aa	OTTMUSP00000036090	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS19064	Q8K2X2
Rbm48-002	OTTMUST00000070735.3	617	143aa	OTTMUSP00000036091	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-
Rbm48-005	OTTMUST00000104227.1	853	34aa	OTTMUSP00000058307	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Rbm48-003	OTTMUST00000070736.1	641	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Rbm48-004	OTTMUST00000070737.1	498	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 4 Transcript length: 853 bps Translation length: 34 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 10/03/2012 (Created on 22/06/2011)

Alternative symbols

AC090443.2-005

Annotation Attributes

not organism-supported [Definitions]

Remarks

CDS start not found

mRNA start not found

Other assemblies

This transcript maps to 3,584,776-3,596,059 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000176000

Curation Method

Manual annotation from Havana