Transcript: Ube2w-003 OTTMUST00000073647.2

Description

ubiquitin-conjugating enzyme E2W (putative)

Location

Chromosome 1: 16,581,936-16,619,259 reverse strand.

About this transcript

This transcript has 6 exons and is annotated with 6 domains and features.

Gene

This transcript is a product of gene OTTMUSG00000029683 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Ube2w-001	OTTMUST00000073645.2	2181	180aa	OTTMUSP00000038156	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS48224	Q8VDW4
Ube2w-006	OTTMUST00000113103.1	1508	175aa	OTTMUSP00000063325	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Ube2w-007	OTTMUST00000123522.1	4526	No protein	-	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-	-
Ube2w-008	OTTMUST00000123521.1	2464	No protein	-	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-	-
Ube2w-003	OTTMUST00000073647.2	493	79aa	OTTMUSP00000038157	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Ube2w-005	OTTMUST00000113104.1	411	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Ube2w-004	OTTMUST00000073648.2	1517	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Ube2w-002	OTTMUST00000073646.1	423	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 6 Transcript length: 493 bps Translation length: 79 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 03/09/2012 (Created on 09/11/2007)

Alternative symbols

AC162448.1-003

Remarks

CDS start not found

mRNA start not found

Other assemblies

This transcript maps to 16,581,936-16,619,259 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000133639

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: Ube2w-003 OTTMUST00000073647.2

Summary

Transcript-based displays