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Summary
- Splice variants
- Transcript comparison
Sequence
Comparative Genomics
- Genomic alignments
- Orthologues
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Gene: SMO OTTHUMG00000158421

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Description

smoothened homolog (Drosophila)

Synonyms

FZD11

Location

Chromosome 7: 129,188,872-129,213,545 forward strand.

VEGA68:CM000669.2

About this gene

This gene has 4 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
SMO-001	OTTHUMT00000350986.1	3738	787aa	OTTHUMP00000212929	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS5811	Q99835
SMO-003	OTTHUMT00000350988.2	787	151aa	OTTHUMP00000212930	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	H7C509	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
SMO-004	OTTHUMT00000350989.1	582	70aa	OTTHUMP00000212931	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	H7C5S9	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
SMO-002	OTTHUMT00000350987.1	732	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

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Summary

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Gene-based displays