This is an archived version of Vega. Click here for more information.

Human

Loading…

Help & Documentation

Summary
- Splice variants
- Transcript comparison
Sequence
Comparative Genomics
- Genomic alignments (2)
- Orthologues (11)
- Alt. alleles
Ontologies
- GO: Cellular component
- GO: Biological process
- GO: Molecular function
Gene expression
External references
Supporting evidence
Other genome browsers
- Ensembl

Configure this page

Share this page

Bookmark this page

.

Gene: SPDYE4 OTTHUMG00000178566

.

Description

speedy homolog E4 (Xenopus laevis)

Location

Chromosome 17: 8,753,106-8,758,559 reverse strand.

VEGA68:CM000679.2

About this gene

This gene has 3 transcripts (splice variants), 11 orthologues and 9 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
SPDYE4-002	OTTHUMT00000442494.1	923	237aa	OTTHUMP00000259673	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS45609	A6NLX3
SPDYE4-003	OTTHUMT00000442496.1	406	91aa	OTTHUMP00000259675	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
SPDYE4-001	OTTHUMT00000442495.1	928	41aa	OTTHUMP00000259674	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-

.

Summary

.

.

Gene-based displays