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Summary
- Splice variants
- Transcript comparison
Sequence
Comparative Genomics
- Genomic alignments
- Orthologues
- Alt. alleles
Ontologies
- GO: Cellular component
- GO: Biological process
- GO: Molecular function
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Gene: SHD OTTHUMG00000181879

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Description

Src homology 2 domain containing transforming protein D

Location

Chromosome 19: 4,278,601-4,290,724 forward strand.

VEGA68:CM000681.2

About this gene

This gene has 5 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
SHD-001	OTTHUMT00000458082.1	2577	340aa	OTTHUMP00000267735	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS12125	Q96IW2
SHD-002	OTTHUMT00000458083.1	1729	300aa	OTTHUMP00000267736	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-
SHD-003	OTTHUMT00000458084.2	558	38aa	OTTHUMP00000268514	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
SHD-004	OTTHUMT00000458085.2	379	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
SHD-005	OTTHUMT00000458086.1	289	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

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Summary

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