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Summary
- Splice variants
- Transcript comparison
Sequence
Comparative Genomics
- Genomic alignments
- Orthologues
- Alt. alleles
Ontologies
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Gene: SYDE1 OTTHUMG00000183207

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Description

synapse defective 1, Rho GTPase, homolog 1 (C. elegans)

Synonyms

7h3, SYD1, FLJ13511

Location

Chromosome 19: 15,107,403-15,114,988 forward strand.

VEGA68:CM000681.2

About this gene

This gene has 5 transcripts (splice variants), 12 orthologues and 10 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
SYDE1-001	OTTHUMT00000465666.1	3264	735aa	OTTHUMP00000271177	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS12324	Q6ZW31
SYDE1-002	OTTHUMT00000465667.1	3058	668aa	OTTHUMP00000271178	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS74299	-
SYDE1-003	OTTHUMT00000465668.1	3832	392aa	OTTHUMP00000271179	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	M0QXZ8
SYDE1-005	OTTHUMT00000465670.2	571	190aa	OTTHUMP00000271181	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	M0R101	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete
SYDE1-004	OTTHUMT00000465669.2	539	170aa	OTTHUMP00000271180	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

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Summary

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Gene-based displays