Description
chromosome 9 open reading frame 173
Location
Chromosome 9: 137,251,261-137,253,483 forward strand.
VEGA68:CM000671.2
About this gene
This gene has 8 transcripts (splice variants).
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | Flags |
|---|---|---|---|---|---|---|---|
| C9orf173-001 | OTTHUMT00000474905.3 | 1207 | 386aa | OTTHUMP00000275159 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS59156 | |
| C9orf173-002 | OTTHUMT00000474906.2 | 1191 | 308aa | OTTHUMP00000275160 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS48065 | |
| C9orf173-003 | OTTHUMT00000474913.1 | 1025 | 253aa | OTTHUMP00000275165 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS75941 | |
| C9orf173-004 | OTTHUMT00000474916.1 | 1015 | 331aa | OTTHUMP00000275167 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS75940 | |
| C9orf173-007 | OTTHUMT00000474915.1 | 1198 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | |
| C9orf173-006 | OTTHUMT00000474918.1 | 1012 | 83aa | OTTHUMP00000275168 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| C9orf173-005 | OTTHUMT00000474914.1 | 948 | 130aa | OTTHUMP00000275166 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | |
| C9orf173-008 | OTTHUMT00000474917.1 | 802 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - |
