This is an archived version of Vega. Click here for more information.

Human

Loading…

Help & Documentation

Summary
- Splice variants
- Transcript comparison
Sequence
Comparative Genomics
- Genomic alignments (3)
- Orthologues (21)
- Alt. alleles
Ontologies
Gene expression
External references
Supporting evidence
Other genome browsers
- Ensembl

Configure this page

Share this page

Bookmark this page

.

Gene: COL4A6 OTTHUMG00000022179

.

Description

collagen, type IV, alpha 6

Location

Chromosome X: 108,155,607-108,439,497 reverse strand.

VEGA68:CM000685.2

About this gene

This gene has 6 transcripts (splice variants), 21 orthologues and 19 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
COL4A6-002	OTTHUMT00000057876.2	6700	1690aa	OTTHUMP00000023835	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS14542	-
COL4A6-001	OTTHUMT00000057875.2	6570	1691aa	OTTHUMP00000023834	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS14541	Q14031
COL4A6-004	OTTHUMT00000315783.1	1889	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
COL4A6-003	OTTHUMT00000057877.2	1784	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
COL4A6-006	OTTHUMT00000315785.1	812	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
COL4A6-005	OTTHUMT00000315784.1	865	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

.

Summary

.

.

Gene-based displays