Description
PRP31 pre-mRNA processing factor 31 homolog (S. cerevisiae)
Synonyms
SNRNP61, hPrp31, PRP31, NY-BR-99
Location
Chromosome 19: 54,115,457-54,131,715 forward strand.
VEGA68:CM000681.2
About this gene
This gene has 11 transcripts (splice variants), 3 orthologues and 2 paralogues.
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| PRPF31-001 | OTTHUMT00000141417.2 | 2126 | 499aa | OTTHUMP00000068806 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS12879 | F1T0A5 | |
| PRPF31-003 | OTTHUMT00000141419.1 | 1767 | 493aa | OTTHUMP00000068808 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | E7EVX8 | |
| PRPF31-005 | OTTHUMT00000142110.2 | 928 | 284aa | OTTHUMP00000069283 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | E7EN72 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| PRPF31-006 | OTTHUMT00000142111.2 | 886 | 276aa | OTTHUMP00000069284 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | E7ESX0 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| PRPF31-009 | OTTHUMT00000142114.4 | 854 | 260aa | OTTHUMP00000069285 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | E7EU94 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| PRPF31-011 | OTTHUMT00000313723.2 | 2049 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| PRPF31-002 | OTTHUMT00000141418.8 | 1409 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| PRPF31-007 | OTTHUMT00000142112.1 | 619 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| PRPF31-008 | OTTHUMT00000142113.3 | 881 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| PRPF31-004 | OTTHUMT00000141420.2 | 1837 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| PRPF31-010 | OTTHUMT00000142115.1 | 289 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
