Description
ubiquitin specific peptidase 39
Synonyms
SAD1, CGI-21, SNRNP65
Location
Chromosome 2: 85,602,856-85,649,283 forward strand.
VEGA68:CM000664.2
About this gene
This gene has 21 transcripts (splice variants).
Transcripts
Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
---|---|---|---|---|---|---|---|---|
USP39-009 | OTTHUMT00000329892.1 | 2177 | 565aa | OTTHUMP00000203272 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS33234 | Q53GS9 | |
USP39-001 | OTTHUMT00000329888.1 | 2034 | 565aa | OTTHUMP00000203271 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS33234 | Q53GS9 | |
USP39-010 | OTTHUMT00000329893.2 | 2033 | 488aa | OTTHUMP00000203273 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS58717 | - | |
USP39-003 | OTTHUMT00000329886.1 | 1946 | 536aa | OTTHUMP00000203269 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | B9A018 | |
USP39-014 | OTTHUMT00000329897.3 | 610 | 129aa | OTTHUMP00000209534 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | C9JIU2 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
USP39-015 | OTTHUMT00000329898.3 | 561 | 113aa | OTTHUMP00000209543 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | C9J0X5 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
USP39-004 | OTTHUMT00000329887.1 | 2141 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
USP39-002 | OTTHUMT00000329885.2 | 1879 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
USP39-008 | OTTHUMT00000329891.1 | 1599 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
USP39-019 | OTTHUMT00000329902.1 | 751 | 154aa | OTTHUMP00000203276 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
USP39-007 | OTTHUMT00000329890.2 | 338 | 61aa | OTTHUMP00000275479 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
USP39-012 | OTTHUMT00000329895.1 | 2148 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
USP39-023 | OTTHUMT00000329906.1 | 1028 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
USP39-022 | OTTHUMT00000329905.1 | 660 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
USP39-021 | OTTHUMT00000329904.1 | 648 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
USP39-018 | OTTHUMT00000329901.1 | 623 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
USP39-013 | OTTHUMT00000329896.1 | 568 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
USP39-024 | OTTHUMT00000329907.1 | 554 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
USP39-020 | OTTHUMT00000329903.1 | 447 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
USP39-016 | OTTHUMT00000329899.1 | 293 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
USP39-006 | OTTHUMT00000329889.3 | 1660 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |