Description
RUN domain and cysteine-rich domain containing, Beclin 1-interacting protein
Synonyms
rundataxin, rubicon
Location
Chromosome 3: 197,671,393-197,749,727 reverse strand.
VEGA68:CM000665.2
About this gene
This gene has 11 transcripts (splice variants) and 1 orthologue.
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| RUBCN-001 | OTTHUMT00000340174.3 | 6955 | 927aa | OTTHUMP00000208021 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS46987 | - | |
| RUBCN-011 | OTTHUMT00000340184.2 | 2919 | 972aa | OTTHUMP00000208026 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS43195 | Q92622 | |
| RUBCN-005 | OTTHUMT00000340178.1 | 3801 | 934aa | OTTHUMP00000208024 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| RUBCN-004 | OTTHUMT00000340177.1 | 2665 | 680aa | OTTHUMP00000208023 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| RUBCN-003 | OTTHUMT00000340176.1 | 1603 | 435aa | OTTHUMP00000208022 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | |
| RUBCN-008 | OTTHUMT00000340181.3 | 615 | 24aa | OTTHUMP00000277788 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| RUBCN-009 | OTTHUMT00000340182.2 | 442 | 147aa | OTTHUMP00000208025 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete |
| RUBCN-002 | OTTHUMT00000340175.1 | 5396 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| RUBCN-006 | OTTHUMT00000340179.1 | 939 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| RUBCN-007 | OTTHUMT00000340180.1 | 416 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| RUBCN-010 | OTTHUMT00000340183.1 | 434 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
