Description
chordin-like 2
Synonyms
BNF1
Location
Chromosome 11: 74,696,429-74,731,385 reverse strand.
VEGA68:CM000673.2
About this gene
This gene has 10 transcripts (splice variants), 4 orthologues and 1 paralogue.
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| CHRDL2-002 | OTTHUMT00000385391.1 | 1867 | 429aa | OTTHUMP00000230491 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS60893 | Q6WN34 | |
| CHRDL2-001 | OTTHUMT00000385390.1 | 1712 | 451aa | OTTHUMP00000230490 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS8234 | - | |
| CHRDL2-003 | OTTHUMT00000385395.1 | 1219 | 308aa | OTTHUMP00000230494 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| CHRDL2-009 | OTTHUMT00000385387.1 | 669 | 177aa | OTTHUMP00000230488 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| CHRDL2-010 | OTTHUMT00000385386.1 | 344 | 91aa | OTTHUMP00000230487 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| CHRDL2-008 | OTTHUMT00000385388.1 | 1030 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| CHRDL2-007 | OTTHUMT00000385389.1 | 1665 | 142aa | OTTHUMP00000230489 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| CHRDL2-005 | OTTHUMT00000385393.1 | 1415 | 142aa | OTTHUMP00000230492 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| CHRDL2-006 | OTTHUMT00000385394.1 | 1321 | 93aa | OTTHUMP00000230493 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| CHRDL2-004 | OTTHUMT00000385392.1 | 1971 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - |
