Description
SCY1-like 2 (S. cerevisiae)
Synonyms
KIAA1360, CVAK104
Location
Chromosome 12: 100,267,140-100,341,724 forward strand.
VEGA68:CM000674.2
About this gene
This gene has 12 transcripts (splice variants) and 1 orthologue.
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| SCYL2-001 | OTTHUMT00000408493.2 | 5779 | 929aa | OTTHUMP00000243487 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS9076 | Q6P3W7 | |
| SCYL2-012 | OTTHUMT00000488082.2 | 3948 | 933aa | OTTHUMP00000281231 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS81726 | A0A0U1RQQ9 | |
| SCYL2-002 | OTTHUMT00000408492.3 | 2328 | 681aa | OTTHUMP00000243486 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | F8VSC5 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| SCYL2-004 | OTTHUMT00000408489.3 | 790 | 76aa | OTTHUMP00000243803 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | F8VPW3 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| SCYL2-003 | OTTHUMT00000408490.2 | 1589 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| SCYL2-008 | OTTHUMT00000408495.3 | 501 | 114aa | OTTHUMP00000243541 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| SCYL2-009 | OTTHUMT00000408497.2 | 429 | 60aa | OTTHUMP00000243542 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| SCYL2-006 | OTTHUMT00000408491.1 | 557 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| SCYL2-011 | OTTHUMT00000408609.1 | 894 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| SCYL2-010 | OTTHUMT00000408498.1 | 542 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| SCYL2-007 | OTTHUMT00000408496.1 | 523 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| SCYL2-005 | OTTHUMT00000408494.1 | 503 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
