Description
histone deacetylase 5
Synonyms
KIAA0600, FLJ90614, NY-CO-9
Location
Chromosome 17: 44,076,746-44,123,702 reverse strand.
VEGA68:CM000679.2
About this gene
This gene has 13 transcripts (splice variants) and 1 orthologue.
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| HDAC5-003 | OTTHUMT00000457683.1 | 5326 | 1123aa | OTTHUMP00000267505 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS32663 | - | |
| HDAC5-002 | OTTHUMT00000457686.1 | 3662 | 1122aa | OTTHUMP00000267507 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS45696 | Q9UQL6 | |
| HDAC5-001 | OTTHUMT00000457684.1 | 5040 | 1037aa | OTTHUMP00000267506 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | |
| HDAC5-010 | OTTHUMT00000457691.2 | 846 | 282aa | OTTHUMP00000267508 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | K7EJL4 | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete |
| HDAC5-009 | OTTHUMT00000457694.2 | 667 | 68aa | OTTHUMP00000267510 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| HDAC5-008 | OTTHUMT00000457695.1 | 504 | 40aa | OTTHUMP00000267511 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| HDAC5-007 | OTTHUMT00000457693.2 | 445 | 79aa | OTTHUMP00000267509 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| HDAC5-006 | OTTHUMT00000457685.1 | 1519 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| HDAC5-004 | OTTHUMT00000457688.1 | 2601 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| HDAC5-005 | OTTHUMT00000457689.1 | 1745 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| HDAC5-011 | OTTHUMT00000457692.1 | 917 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| HDAC5-012 | OTTHUMT00000457690.1 | 742 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| HDAC5-013 | OTTHUMT00000457687.1 | 465 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
