Description
SNF2 histone linker PHD RING helicase
Location
Chromosome 6: 145,917,113-145,964,423 reverse strand.
About this transcript
This transcript has 24 exons and is annotated with 27 domains and features.
Gene
This transcript is a product of gene OTTHUMG00000015750 Show transcript tableHide transcript table
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| SHPRH-001 | OTTHUMT00000042571.2 | 7201 | 1683aa | OTTHUMP00000017363 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS43513 | Q149N8 | |
| SHPRH-005 | OTTHUMT00000376107.1 | 6994 | 1659aa | OTTHUMP00000225224 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS47496 | - | |
| SHPRH-004 | OTTHUMT00000376094.1 | 6649 | 1683aa | OTTHUMP00000225216 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS43513 | Q149N8 | |
| SHPRH-002 | OTTHUMT00000042572.1 | 468 | 129aa | OTTHUMP00000017364 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| SHPRH-006 | OTTHUMT00000376108.1 | 680 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| SHPRH-007 | OTTHUMT00000376109.1 | 11660 | 449aa | OTTHUMP00000225225 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | H7C2W2 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| SHPRH-003 | OTTHUMT00000376093.1 | 5245 | 929aa | OTTHUMP00000225215 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| SHPRH-009 | OTTHUMT00000376111.1 | 927 | 97aa | OTTHUMP00000225226 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| SHPRH-008 | OTTHUMT00000376110.1 | 2030 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| SHPRH-010 | OTTHUMT00000376112.1 | 821 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
