Transcript: PDZD7-004 OTTHUMT00000049884.3

Description

PDZ domain containing 7

Location

About this transcript

This transcript has 13 exons and is annotated with 6 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
PDZD7-003	OTTHUMT00000049883.1	2032	517aa	OTTHUMP00000020294	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS31269	Q9H5P4
PDZD7-001	OTTHUMT00000049881.2	1057	181aa	OTTHUMP00000272705	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-
PDZD7-005	OTTHUMT00000049885.2	624	208aa	OTTHUMP00000020295	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete
PDZD7-004	OTTHUMT00000049884.3	4433	133aa	OTTHUMP00000272704	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
PDZD7-002	OTTHUMT00000049882.1	1591	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 13 Transcript length: 4,433 bps Translation length: 133 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 3, last modified on 28/02/2014 (Created on 06/06/2003)

Alternative symbols

RP11-108L7.9-004

Remarks

novel transcript (FLJ00011)

Other assemblies

This transcript maps to 101,007,683-101,031,105 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000474125

Curation Method

Manual annotation from Havana