Transcript: FBXW5-004 OTTHUMT00000055230.2

Description

F-box and WD repeat domain containing 5

Location

Chromosome 9: 136,942,907-136,944,534 reverse strand.

About this transcript

This transcript has 3 exons and is annotated with 13 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000020967 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
FBXW5-001	OTTHUMT00000055227.1	2274	566aa	OTTHUMP00000022659	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS7014	A0A024R8H7
FBXW5-004	OTTHUMT00000055230.2	839	129aa	OTTHUMP00000022662	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
FBXW5-008	OTTHUMT00000055234.2	718	200aa	OTTHUMP00000022665	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
FBXW5-005	OTTHUMT00000055231.3	1932	193aa	OTTHUMP00000278021	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
FBXW5-007	OTTHUMT00000055233.2	785	117aa	OTTHUMP00000278022	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
FBXW5-003	OTTHUMT00000055229.2	2392	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
FBXW5-002	OTTHUMT00000055228.2	2339	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
FBXW5-009	OTTHUMT00000055235.2	1442	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 3 Transcript length: 839 bps Translation length: 129 residues

Class

protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 09/07/2015 (Created on 13/05/2003)

Alternative symbols

RP11-229P13.10-004

Remarks

novel protein (likely ortholog of mouse f-box and WD-40 domain protein 5 (FBXW5))

CDS end not found

mRNA end not found

Other assemblies

This transcript maps to 136,942,907-136,944,534 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000443788

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: FBXW5-004 OTTHUMT00000055230.2

Summary

Transcript-based displays