Transcript: CCDC142-002 OTTHUMT00000328390.1

Description

coiled-coil domain containing 142

Location

Chromosome 2: 74,471,986-74,482,542 reverse strand.

About this transcript

This transcript has 11 exons and is annotated with 7 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000129962 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	Flags
CCDC142-001	OTTHUMT00000252226.2	2835	743aa	OTTHUMP00000160422	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS1945
CCDC142-003	OTTHUMT00000328391.1	3406	750aa	OTTHUMP00000202626	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-
CCDC142-002	OTTHUMT00000328390.1	2309	567aa	OTTHUMP00000202625	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
CCDC142-009	OTTHUMT00000328397.1	1035	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-
CCDC142-008	OTTHUMT00000328396.1	735	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-
CCDC142-007	OTTHUMT00000328395.1	810	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-
CCDC142-005	OTTHUMT00000328393.1	671	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-
CCDC142-004	OTTHUMT00000328392.1	645	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-
CCDC142-006	OTTHUMT00000328394.1	566	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-

Summary

Statistics

Exons: 11 Transcript length: 2,309 bps Translation length: 567 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 28/02/2014 (Created on 09/05/2008)

Alternative symbols

AC073046.6-002

Remarks

CDS start not found

mRNA start not found

Other assemblies

This transcript maps to 74,471,986-74,482,542 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000454193

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: CCDC142-002 OTTHUMT00000328390.1

Summary

Transcript-based displays