Transcript: PRKAG3-001 OTTHUMT00000256722.2

Description

protein kinase, AMP-activated, gamma 3 non-catalytic subunit

Location

About this transcript

This transcript has 14 exons and is annotated with 19 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
PRKAG3-006	OTTHUMT00000385992.1	2222	489aa	OTTHUMP00000230855	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS2424	A0A024R426
PRKAG3-005	OTTHUMT00000336556.2	331	100aa	OTTHUMP00000206394	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
PRKAG3-004	OTTHUMT00000336555.1	1784	No protein	-	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-	-
PRKAG3-001	OTTHUMT00000256722.2	2326	489aa	OTTHUMP00000164095	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	CCDS2424	A0A024R426
PRKAG3-003	OTTHUMT00000336554.1	1199	353aa	OTTHUMP00000206393	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	B4DUK8
PRKAG3-002	OTTHUMT00000336553.1	1619	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 14 Transcript length: 2,326 bps Translation length: 489 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS2424

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 28/02/2014 (Created on 20/01/2006)

Alternative symbols

AC009974.7-001

Other assemblies

This transcript maps to 218,822,383-218,831,816 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000233944

Curation Method

Manual annotation from Havana