Transcript: CACTIN-005 OTTHUMT00000457372.2

Description

cactin, spliceosome C complex subunit

Location

Chromosome 19: 3,610,645-3,613,538 reverse strand.

About this transcript

This transcript has 4 exons and is annotated with 9 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000180808 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
CACTIN-007	OTTHUMT00000457370.2	3612	758aa	OTTHUMP00000267344	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS45920	Q8WUQ7
CACTIN-005	OTTHUMT00000457372.2	1220	291aa	OTTHUMP00000267979	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
CACTIN-008	OTTHUMT00000457371.2	699	117aa	OTTHUMP00000267978	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	K7EIU6	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
CACTIN-006	OTTHUMT00000457373.3	391	130aa	OTTHUMP00000267981	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete
CACTIN-001	OTTHUMT00000453084.2	2810	758aa	OTTHUMP00000265347	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	CCDS45920	Q8WUQ7
CACTIN-003	OTTHUMT00000453298.3	1708	141aa	OTTHUMP00000267980	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
CACTIN-004	OTTHUMT00000457374.1	2283	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
CACTIN-002	OTTHUMT00000453085.2	2216	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 4 Transcript length: 1,220 bps Translation length: 291 residues

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 28/02/2014 (Created on 11/05/2012)

Alternative symbols

AC005175.2-005

Remarks

alternative 3' UTR

CDS start not found

mRNA start not found

Other assemblies

This transcript maps to 3,610,645-3,613,538 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000592721

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: CACTIN-005 OTTHUMT00000457372.2

Summary

Transcript-based displays