Description
TAR DNA binding protein
Location
Chromosome 4: 148,612,382-148,627,019 reverse strand.
View alleles of this gene on alternate assemblies
About this gene
This gene has 29 transcripts (splice variants), 1 gene allele, 2 orthologues and 1 paralogue.
Transcripts
Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
---|---|---|---|---|---|---|---|---|
Tardbp-001 | OTTMUST00000025673.1 | 7477 | 414aa | OTTMUSP00000011770 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS38971 | Q544R5 | |
Tardbp-006 | OTTMUST00000025678.2 | 1904 | 295aa | OTTMUSP00000011774 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS38970 | Q8R0B4 | |
Tardbp-012 | OTTMUST00000118267.2 | 1096 | 298aa | OTTMUSP00000066025 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS38969 | Q8BLD4 | |
Tardbp-007 | OTTMUST00000025679.2 | 1011 | 304aa | OTTMUSP00000011775 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS38968 | Q6VYI4 | |
Tardbp-003 | OTTMUST00000025675.3 | 923 | 302aa | OTTMUSP00000011772 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS38967 | Q6VYI5 | |
Tardbp-015 | OTTMUST00000118269.2 | 818 | 243aa | OTTMUSP00000066027 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | A0A087WR97 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
Tardbp-025 | OTTMUST00000118283.1 | 814 | 19aa | OTTMUSP00000066036 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | A0A087WQ63 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
Tardbp-021 | OTTMUST00000118284.1 | 748 | 85aa | OTTMUSP00000066037 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | A0A087WQX8 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
Tardbp-014 | OTTMUST00000118270.2 | 740 | 149aa | OTTMUSP00000066028 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | A0A087WSE4 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
Tardbp-016 | OTTMUST00000118285.1 | 709 | 200aa | OTTMUSP00000066038 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | A0A087WQA5 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
Tardbp-019 | OTTMUST00000118282.1 | 570 | 128aa | OTTMUSP00000066035 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | A0A087WS74 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
Tardbp-022 | OTTMUST00000118274.1 | 529 | 99aa | OTTMUSP00000066030 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | A0A087WSC6 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
Tardbp-008 | OTTMUST00000118266.1 | 2647 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
Tardbp-010 | OTTMUST00000118265.1 | 1148 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
Tardbp-002 | OTTMUST00000025674.3 | 2006 | 298aa | OTTMUSP00000031999 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | CCDS38969 | Q8BLD4 | |
Tardbp-024 | OTTMUST00000118272.1 | 1773 | 298aa | OTTMUSP00000066029 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | CCDS38969 | Q8BLD4 | |
Tardbp-011 | OTTMUST00000118268.1 | 1411 | 84aa | OTTMUSP00000066026 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | A0A087WP57 | |
Tardbp-009 | OTTMUST00000118264.1 | 1304 | 285aa | OTTMUSP00000066024 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | A0A087WRZ5 | |
Tardbp-005 | OTTMUST00000025677.3 | 1011 | 35aa | OTTMUSP00000066008 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | A0A087WQT4 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
Tardbp-004 | OTTMUST00000025676.4 | 781 | 140aa | OTTMUSP00000057922 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | H3BJV1 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
Tardbp-017 | OTTMUST00000118279.1 | 741 | 175aa | OTTMUSP00000066032 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | A0A087WSH7 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
Tardbp-018 | OTTMUST00000118280.1 | 684 | 138aa | OTTMUSP00000066033 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | A0A087WRP4 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
Tardbp-023 | OTTMUST00000118275.1 | 676 | 88aa | OTTMUSP00000066031 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | A0A087WNY6 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
Tardbp-020 | OTTMUST00000118281.1 | 517 | 78aa | OTTMUSP00000066034 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | A0A087WS17 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
Tardbp-026 | OTTMUST00000118276.1 | 908 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
Tardbp-029 | OTTMUST00000118273.1 | 731 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
Tardbp-028 | OTTMUST00000118277.1 | 629 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
Tardbp-027 | OTTMUST00000118278.1 | 358 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
Tardbp-013 | OTTMUST00000118271.1 | 370 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |