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Summary
- Splice variants
- Transcript comparison
Sequence
Comparative Genomics
- Genomic alignments (1)
- Orthologues (30)
- Alt. alleles
Ontologies
Gene expression
External references
Supporting evidence
Other genome browsers
- Ensembl

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Gene: Col4a3 OTTMUSG00000021696

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Description

procollagen type IV alpha 3

Location

Chromosome 1: 82,586,921-82,722,059 forward strand.

About this gene

This gene has 4 transcripts (splice variants), 30 orthologues and 25 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Col4a3-001	OTTMUST00000051474.1	8554	1669aa	OTTMUSP00000024235	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS35631	Q9QZS0
Col4a3-003	OTTMUST00000051476.1	627	197aa	OTTMUSP00000024236	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	F6RIS8	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Col4a3-002	OTTMUST00000051475.2	524	61aa	OTTMUSP00000062993	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	M0QWQ2	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Col4a3-004	OTTMUST00000051477.1	1926	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

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Summary

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Gene-based displays