Description
sphingosine kinase 1
Location
Chromosome 11: 116,530,925-116,536,674 forward strand.
About this gene
This gene has 16 transcripts (splice variants), 2 orthologues and 1 paralogue.
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| Sphk1-006 | OTTMUST00000008632.1 | 2659 | 382aa | OTTMUSP00000004205 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS25668 | Q8CI15 | |
| Sphk1-005 | OTTMUST00000008631.1 | 2527 | 382aa | OTTMUSP00000004204 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS25668 | Q8CI15 | |
| Sphk1-002 | OTTMUST00000008628.1 | 1957 | 382aa | OTTMUSP00000004201 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS25668 | Q8CI15 | |
| Sphk1-003 | OTTMUST00000008629.2 | 1891 | 382aa | OTTMUSP00000004202 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS25668 | Q8CI15 | |
| Sphk1-004 | OTTMUST00000008630.2 | 1879 | 382aa | OTTMUSP00000004203 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS25668 | Q8CI15 | |
| Sphk1-001 | OTTMUST00000008627.2 | 1800 | 381aa | OTTMUSP00000004200 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS48986 | - | |
| Sphk1-007 | OTTMUST00000008633.2 | 1532 | 388aa | OTTMUSP00000051871 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS25669 | - | |
| Sphk1-012 | OTTMUST00000008638.2 | 1050 | 251aa | OTTMUSP00000004209 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | B1AT89 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| Sphk1-010 | OTTMUST00000008636.2 | 904 | 157aa | OTTMUSP00000004207 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | B1AT88 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| Sphk1-014 | OTTMUST00000008640.2 | 863 | 153aa | OTTMUSP00000004210 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | B1AT86 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| Sphk1-008 | OTTMUST00000008634.2 | 735 | 153aa | OTTMUSP00000004206 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | B1AT87 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| Sphk1-011 | OTTMUST00000008637.2 | 663 | 116aa | OTTMUSP00000004208 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | B1AT85 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| Sphk1-013 | OTTMUST00000008639.1 | 740 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| Sphk1-016 | OTTMUST00000008642.1 | 4063 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| Sphk1-009 | OTTMUST00000008635.1 | 600 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| Sphk1-015 | OTTMUST00000008641.1 | 522 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
