Description
thrombospondin 3
Location
Chromosome 3: 89,214,050-89,226,837 forward strand.
About this gene
This gene has 12 transcripts (splice variants), 5 orthologues and 3 paralogues.
Transcripts
Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
---|---|---|---|---|---|---|---|---|
Thbs3-001 | OTTMUST00000075214.1 | 3190 | 956aa | OTTMUSP00000039372 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS17495 | Q05895 | |
Thbs3-003 | OTTMUST00000075216.1 | 2993 | 919aa | OTTMUSP00000039373 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | E9PWF0 | |
Thbs3-011 | OTTMUST00000075224.2 | 435 | 131aa | OTTMUSP00000039375 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | D3Z6N1 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
Thbs3-012 | OTTMUST00000131873.1 | 2484 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
Thbs3-007 | OTTMUST00000075220.1 | 776 | 104aa | OTTMUSP00000039374 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | F6W6J3 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
Thbs3-005 | OTTMUST00000075218.1 | 455 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
Thbs3-002 | OTTMUST00000075215.1 | 4034 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
Thbs3-004 | OTTMUST00000075217.1 | 779 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
Thbs3-006 | OTTMUST00000075219.1 | 745 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
Thbs3-008 | OTTMUST00000075221.1 | 739 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
Thbs3-010 | OTTMUST00000075223.1 | 455 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
Thbs3-009 | OTTMUST00000075222.1 | 426 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |