Transcript: Ccdc171-006 OTTMUST00000116979.1

Description

coiled-coil domain containing 171

Location

About this transcript

This transcript has 25 exons and is annotated with 8 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt
Ccdc171-001	OTTMUST00000001630.3	4525	1324aa	OTTMUSP00000000773	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS51215	E9Q1U1
Ccdc171-002	OTTMUST00000001631.2	1388	132aa	OTTMUSP00000065427	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-
Ccdc171-004	OTTMUST00000001633.2	3283	No protein	-	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-	-
Ccdc171-006	OTTMUST00000116979.1	4231	368aa	OTTMUSP00000065428	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
Ccdc171-005	OTTMUST00000008994.2	1075	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Ccdc171-003	OTTMUST00000001632.2	754	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-

Summary

Statistics

Exons: 25 Transcript length: 4,231 bps Translation length: 368 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 08/02/2013 (Created on 08/02/2013)

Alternative symbols

RP23-311B24.5-006

Other assemblies

This transcript maps to 83,525,639-83,864,585 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000125077

Curation Method

Manual annotation from Havana