Transcript: RP23-341C5.3-001 OTTMUST00000006224.3

Description

novel EF-hand domain containing protein (1700023F06Rik)

Location

About this transcript

This transcript has 10 exons and is annotated with 8 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
RP23-341C5.3-001	OTTMUST00000006224.3	1199	382aa	OTTMUSP00000002935	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS56814	A2AB62
RP23-341C5.3-004	OTTMUST00000095183.3	643	196aa	OTTMUSP00000053088	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	G3UZ03	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
RP23-341C5.3-003	OTTMUST00000095182.2	1127	No protein	-	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-	-
RP23-341C5.3-005	OTTMUST00000095292.2	779	191aa	OTTMUSP00000066212	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	A0A087WPM6
RP23-341C5.3-002	OTTMUST00000006225.2	594	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 10 Transcript length: 1,199 bps Translation length: 382 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS56814

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 3, last modified on 12/09/2013 (Created on 22/07/2004)

Remarks

1700023F06Rik

NP_001241653.1

Other assemblies

This transcript maps to 103,198,944-103,208,548 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000021323

Curation Method

Manual annotation from Havana