Transcript: Ccdc88a-004 OTTMUST00000011878.2

Description

coiled coil domain containing 88A

Location

Chromosome 11: 29,485,979-29,503,518 forward strand.

About this transcript

This transcript has 9 exons and is annotated with 11 domains and features.

Gene

This transcript is a product of gene OTTMUSG00000005327 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Ccdc88a-001	OTTMUST00000011875.1	9376	1845aa	OTTMUSP00000005499	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS24494	-
Ccdc88a-002	OTTMUST00000011876.2	2209	737aa	OTTMUSP00000005500	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	F6R1B7	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete
Ccdc88a-007	OTTMUST00000011881.1	1716	117aa	OTTMUSP00000005503	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	Z4YKY0
Ccdc88a-003	OTTMUST00000011877.2	1217	405aa	OTTMUSP00000005501	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	Z4YLP6	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete
Ccdc88a-004	OTTMUST00000011878.2	1064	354aa	OTTMUSP00000005502	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	Z4YLN8	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete
Ccdc88a-006	OTTMUST00000011880.1	682	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Ccdc88a-005	OTTMUST00000011879.1	487	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-

Summary

Statistics

Exons: 9 Transcript length: 1,064 bps Translation length: 354 residues

Class

protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 10/07/2015 (Created on 26/08/2003)

Alternative symbols

RP23-92B18.2-004

Remarks

novel protein

this variant and variant fragment bM92B18.1.3 could be part of one single variant

CDS start not found

CDS end not found

mRNA start not found

mRNA end not found

Other assemblies

This transcript maps to 29,485,979-29,503,518 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000140194

Curation Method

Manual annotation from Havana

Select a species

Recent locations

Transcript: Ccdc88a-004 OTTMUST00000011878.2

Summary

Transcript-based displays