Transcript: Phykpl-001 OTTMUST00000012468.2

Description

5-phosphohydroxy-L-lysine phospholyase

Location

Chromosome 11: 51,584,757-51,604,489 forward strand.

About this transcript

This transcript has 13 exons and is annotated with 10 domains and features.

Gene

This transcript is a product of gene OTTMUSG00000005604 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt
Phykpl-001	OTTMUST00000012468.2	3116	467aa	OTTMUSP00000005767	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS24653	Q8R1K4
Phykpl-004	OTTMUST00000090428.1	1609	468aa	OTTMUSP00000049607	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-
Phykpl-005	OTTMUST00000090427.1	2225	231aa	OTTMUSP00000049606	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	F8WHK6
Phykpl-003	OTTMUST00000012470.2	3889	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Phykpl-006	OTTMUST00000090429.1	1877	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Phykpl-002	OTTMUST00000012469.2	1724	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Phykpl-008	OTTMUST00000090431.1	829	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Phykpl-007	OTTMUST00000090430.1	510	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 13 Transcript length: 3,116 bps Translation length: 467 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS24653

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 10/03/2012 (Created on 04/09/2003)

Alternative symbols

RP23-79E13.3-001

Remarks

novel protein (2900006B13Rik)

Other assemblies

This transcript maps to 51,584,757-51,604,489 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000167797

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: Phykpl-001 OTTMUST00000012468.2

Summary

Transcript-based displays