Transcript: Aptx-004 OTTMUST00000014996.1

Description

aprataxin

Location

About this transcript

This transcript has 8 exons and is annotated with 13 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt
Aptx-004	OTTMUST00000014996.1	5383	342aa	OTTMUSP00000006929	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS38711	Q7TQC5
Aptx-001	OTTMUST00000014993.2	5250	335aa	OTTMUSP00000006927	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS38712	-
Aptx-003	OTTMUST00000014995.1	2391	240aa	OTTMUSP00000006928	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-
Aptx-002	OTTMUST00000014994.2	1378	48aa	OTTMUSP00000047605	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	E0CXB7
Aptx-005	OTTMUST00000014997.2	639	48aa	OTTMUSP00000047606	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	E0CXB7
Aptx-006	OTTMUST00000014998.1	355	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-

Summary

Statistics

Exons: 8 Transcript length: 5,383 bps Translation length: 342 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS38711

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 01/10/2013 (Created on 18/10/2004)

Alternative symbols

RP23-135L5.3-004

Remarks

5330434N14Rik

Other assemblies

This transcript maps to 40,682,382-40,702,914 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000068125

Curation Method

Manual annotation from Havana