Transcript: Hyi-002 OTTMUST00000070777.2

Description

hydroxypyruvate isomerase homolog (E. coli)

Location

About this transcript

This transcript has 8 exons.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS
Hyi-001	OTTMUST00000019808.2	843	69aa	OTTMUSP00000009081	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-
Hyi-002	OTTMUST00000070777.2	936	268aa	OTTMUSP00000062693	<p>Pseudogene loci in one genome (e.g. the reference) but coding in other genomes (i.e. non-reference) due to short or large scale genomic variation in some individuals/haplotypes/strains in a given population/species. It can be known elsewhere as segregating pseudogenes or SPGs.</p>Polymorphic pseudogene	-
Hyi-004	OTTMUST00000111835.1	1296	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-
Hyi-003	OTTMUST00000070778.1	741	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-

Summary

Statistics

Exons: 8 Transcript length: 936 bps Translation length: 268 residues

Class

polymorphic pseudogene [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 05/02/2013 (Created on 13/09/2007)

Alternative symbols

RP23-145E1.1-002

Remarks

CDS interrupted in exon 2 by tandem repeat in C57BL/6 reference genome

Other assemblies

This transcript maps to 118,359,990-118,362,744 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000194248

Curation Method

Manual annotation from Havana