Transcript: Rabepk-004 OTTMUST00000077927.1

Description

Rab9 effector protein with kelch motifs

Location

Chromosome 2: 34,785,031-34,799,901 reverse strand.

About this transcript

This transcript has 5 exons.

Gene

This transcript is a product of gene OTTMUSG00000012015 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Rabepk-001	OTTMUST00000028502.2	2968	380aa	OTTMUSP00000012898	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS15951	Q8VCH5
Rabepk-006	OTTMUST00000028507.3	1431	372aa	OTTMUSP00000041318	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-
Rabepk-002	OTTMUST00000028503.3	1106	321aa	OTTMUSP00000012899	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-
Rabepk-004	OTTMUST00000077927.1	1223	52aa	OTTMUSP00000041316	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
Rabepk-007	OTTMUST00000028508.2	763	64aa	OTTMUSP00000041319	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Rabepk-005	OTTMUST00000028506.2	542	76aa	OTTMUSP00000041317	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
Rabepk-003	OTTMUST00000028509.2	600	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 5 Transcript length: 1,223 bps Translation length: 52 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 10/03/2012 (Created on 15/02/2008)

Alternative symbols

RP23-446N16.2-004

Other assemblies

This transcript maps to 34,785,031-34,799,901 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000140663

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: Rabepk-004 OTTMUST00000077927.1

Summary

Transcript-based displays