Transcript: Olfr1293-ps-002 OTTMUST00000157978.1

Description

olfactory receptor 1293

Location

About this transcript

This transcript has 3 exons and is annotated with 25 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	Flags
Olfr1293-ps-001	OTTMUST00000035781.5	3628	311aa	OTTMUSP00000080564	<p>Pseudogene loci in one genome (e.g. the reference) but coding in other genomes (i.e. non-reference) due to short or large scale genomic variation in some individuals/haplotypes/strains in a given population/species. It can be known elsewhere as segregating pseudogenes or SPGs.</p>Polymorphic pseudogene	-
Olfr1293-ps-002	OTTMUST00000157978.1	1219	311aa	OTTMUSP00000082175	<p>Pseudogene loci in one genome (e.g. the reference) but coding in other genomes (i.e. non-reference) due to short or large scale genomic variation in some individuals/haplotypes/strains in a given population/species. It can be known elsewhere as segregating pseudogenes or SPGs.</p>Polymorphic pseudogene	-

Summary

Statistics

Exons: 3 Transcript length: 1,219 bps Translation length: 311 residues

Class

polymorphic pseudogene [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 13/09/2016 (Created on 13/09/2016)

Alternative symbols

RP23-336F11.11-002

Annotation Attributes

RNA-Seq supported partial [Definitions]

Remarks

A polymorphic pseudogene which is also subject to NMD (12/09/2016 - ib2)

Mouse Olfr RNA-Seq data ENA IDs PRJEB1365, ERS658588, ERS658589, ERS658590, ERS658591, ERS658592, ERS658593

Other assemblies

This transcript maps to 111,525,203-111,533,279 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000215245

Curation Method

Manual annotation from Havana