Transcript: Shf-005 OTTMUST00000037079.1

Description

Src homology 2 domain containing F

Location

Chromosome 2: 122,349,128-122,359,586 reverse strand.

About this transcript

This transcript has 6 exons and is annotated with 17 domains and features.

Gene

This transcript is a product of gene OTTMUSG00000015613 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Shf-001	OTTMUST00000037075.1	1431	238aa	OTTMUSP00000016624	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS16662	Q8CG80
Shf-003	OTTMUST00000037077.1	1566	446aa	OTTMUSP00000016625	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Shf-002	OTTMUST00000037076.3	1539	364aa	OTTMUSP00000041160	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Shf-005	OTTMUST00000037079.1	1188	320aa	OTTMUSP00000016627	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Shf-004	OTTMUST00000037078.1	1116	296aa	OTTMUSP00000016626	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Shf-007	OTTMUST00000037081.1	910	232aa	OTTMUSP00000016628	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-
Shf-008	OTTMUST00000037082.2	882	158aa	OTTMUSP00000041161	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-
Shf-009	OTTMUST00000037083.3	486	162aa	OTTMUSP00000041162	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete
Shf-006	OTTMUST00000037080.1	403	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 6 Transcript length: 1,188 bps Translation length: 320 residues

Class

Putative protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 10/03/2012 (Created on 20/02/2006)

Alternative symbols

RP23-173H17.6-005

Remarks

CDS start not found

mRNA start not found

Other assemblies

This transcript maps to 122,349,128-122,359,586 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000139819

Curation Method

Manual annotation from Havana

Select a species

Recent locations

Transcript: Shf-005 OTTMUST00000037079.1

Summary

Transcript-based displays