Transcript: Mcam-006 OTTMUST00000153889.1

Description

melanoma cell adhesion molecule

Location

About this transcript

This transcript has 4 exons and is annotated with 8 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Mcam-001	OTTMUST00000040547.2	2989	648aa	OTTMUSP00000018124	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS23097	Q8R2Y2
Mcam-002	OTTMUST00000077911.1	2772	606aa	OTTMUSP00000041305	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-
Mcam-006	OTTMUST00000153889.1	457	142aa	OTTMUSP00000079596	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
Mcam-005	OTTMUST00000077914.1	449	149aa	OTTMUSP00000041307	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete
Mcam-003	OTTMUST00000077912.1	1061	146aa	OTTMUSP00000041306	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
Mcam-004	OTTMUST00000077913.1	832	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 4 Transcript length: 457 bps Translation length: 142 residues

Class

Novel protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 21/06/2016 (Created on 21/06/2016)

Alternative symbols

RP24-329C11.1-006

Remarks

NAGNAG splice site

CDS end not found

mRNA end not found

Other assemblies

This transcript maps to 44,134,661-44,137,069 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000216002

Curation Method

Manual annotation from Havana