Transcript: Xlr3a-004 OTTMUST00000096660.1

Description

X-linked lymphocyte-regulated 3A

Location

Chromosome X: 73,090,951-73,096,878 reverse strand.

About this transcript

This transcript has 6 exons and is annotated with 3 domains and features.

Gene

This transcript is a product of gene OTTMUSG00000017651 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Xlr3a-002	OTTMUST00000042849.4	1645	221aa	OTTMUSP00000019238	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS53092	-
Xlr3a-001	OTTMUST00000043096.2	1584	226aa	OTTMUSP00000019382	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	Q60595
Xlr3a-006	OTTMUST00000096658.1	648	33aa	OTTMUSP00000054014	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Xlr3a-004	OTTMUST00000096660.1	536	49aa	OTTMUSP00000054015	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
Xlr3a-007	OTTMUST00000096659.2	383	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Xlr3a-005	OTTMUST00000096656.1	3783	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Xlr3a-003	OTTMUST00000096662.1	360	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 6 Transcript length: 536 bps Translation length: 49 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 10/03/2012 (Created on 16/02/2011)

Alternative symbols

RP23-11C16.6-004

Other assemblies

This transcript maps to 73,090,951-73,096,878 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000173742

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: Xlr3a-004 OTTMUST00000096660.1

Summary

Transcript-based displays