Transcript: RP23-220D12.11-005 OTTMUST00000044527.3

Description

likely orthologue of H. sapiens chromosome 20 open reading frame 173 (C20orf173)

Location

Chromosome 2: 156,003,242-156,007,977 reverse strand.

About this transcript

This transcript has 4 exons and is annotated with 4 domains and features.

Gene

This transcript is a product of gene OTTMUSG00000018447 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
RP23-220D12.11-001	OTTMUST00000044523.2	1520	108aa	OTTMUSP00000029679	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS50774	-
RP23-220D12.11-005	OTTMUST00000044527.3	573	141aa	OTTMUSP00000020718	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	A3KGJ9	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
RP23-220D12.11-006	OTTMUST00000044528.3	549	137aa	OTTMUSP00000029680	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	B7ZCN6	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
RP23-220D12.11-004	OTTMUST00000044526.4	471	139aa	OTTMUSP00000020717	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
RP23-220D12.11-008	OTTMUST00000060768.2	423	112aa	OTTMUSP00000029678	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	B7ZCN8	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
RP23-220D12.11-007	OTTMUST00000060767.2	294	50aa	OTTMUSP00000029677	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
RP23-220D12.11-003	OTTMUST00000044525.2	2429	103aa	OTTMUSP00000039220	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
RP23-220D12.11-002	OTTMUST00000044524.1	2306	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 4 Transcript length: 573 bps Translation length: 141 residues

Class

Putative protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 3, last modified on 10/07/2015 (Created on 17/07/2006)

Remarks

CDS end not found

mRNA end not found

Other assemblies

This transcript maps to 156,003,242-156,007,977 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000140657

Curation Method

Manual annotation from Havana

Select a species

Recent locations

Transcript: RP23-220D12.11-005 OTTMUST00000044527.3

Summary

Transcript-based displays