Transcript: Snx27-005 OTTMUST00000055672.2

Description

sorting nexin family member 27

Location

Chromosome 3: 94,502,057-94,562,032 reverse strand.

About this transcript

This transcript has 11 exons and is annotated with 12 domains and features.

Gene

This transcript is a product of gene OTTMUSG00000019563 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Snx27-001	OTTMUST00000046710.1	6261	526aa	OTTMUSP00000021101	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS38538	-
Snx27-002	OTTMUST00000046711.1	3531	539aa	OTTMUSP00000021102	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS38537	Q3UHD6
Snx27-005	OTTMUST00000055672.2	1308	435aa	OTTMUSP00000026689	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	A0A0G2JF85
Snx27-006	OTTMUST00000055673.2	2510	63aa	OTTMUSP00000038517	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
Snx27-004	OTTMUST00000047023.2	599	110aa	OTTMUSP00000038516	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	A0A0G2JGD5	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Snx27-009	OTTMUST00000132241.1	734	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Snx27-007	OTTMUST00000132243.1	649	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Snx27-008	OTTMUST00000132242.1	599	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-

Summary

Statistics

Exons: 11 Transcript length: 1,308 bps Translation length: 435 residues

Class

Putative protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 10/07/2015 (Created on 12/02/2007)

Alternative symbols

AC122808.1-005

Other assemblies

This transcript maps to 94,502,057-94,562,032 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000200642

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: Snx27-005 OTTMUST00000055672.2

Summary

Transcript-based displays