Transcript: Plxnb1-001 OTTMUST00000049801.3

Description

plexin B1

Location

Chromosome 9: 109,095,389-109,119,917 forward strand.

About this transcript

This transcript has 38 exons and is annotated with 44 domains and features.

Gene

This transcript is a product of gene OTTMUSG00000021053 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Plxnb1-001	OTTMUST00000049801.3	8649	2119aa	OTTMUSP00000023130	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS23546	Q8CJH3
Plxnb1-004	OTTMUST00000129671.3	799	266aa	OTTMUSP00000071681	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	A0A0G2JDM9	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete
Plxnb1-002	OTTMUST00000049802.3	731	140aa	OTTMUSP00000023131	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	D3YUD0	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
Plxnb1-003	OTTMUST00000049803.1	585	140aa	OTTMUSP00000023132	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	D3YUD0	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
Plxnb1-006	OTTMUST00000129673.1	737	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Plxnb1-005	OTTMUST00000129674.1	729	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Plxnb1-007	OTTMUST00000129672.1	651	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 38 Transcript length: 8,649 bps Translation length: 2,119 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS23546

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 3, last modified on 22/10/2014 (Created on 16/10/2006)

Alternative symbols

RP24-212K17.1-001

Other assemblies

This transcript maps to 109,095,389-109,119,917 in GRCm38 (Ensembl) coordinates.

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Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000072093

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: Plxnb1-001 OTTMUST00000049801.3

Summary

Transcript-based displays