Transcript: Trappc6a-001 OTTMUST00000052964.2

Description

trafficking protein particle complex 6A

Location

Chromosome 7: 19,508,712-19,516,145 forward strand.

About this transcript

This transcript has 6 exons and is annotated with 5 domains and features.

Gene

This transcript is a product of gene OTTMUSG00000022255 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Trappc6a-001	OTTMUST00000052964.2	785	159aa	OTTMUSP00000025165	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS20905	Q78XR0
Trappc6a-003	OTTMUST00000052966.1	651	183aa	OTTMUSP00000025166	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-
Trappc6a-006	OTTMUST00000052969.1	505	81aa	OTTMUSP00000025167	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Trappc6a-004	OTTMUST00000052967.2	734	36aa	OTTMUSP00000044793	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
Trappc6a-002	OTTMUST00000052965.2	719	36aa	OTTMUSP00000044792	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
Trappc6a-005	OTTMUST00000052968.1	955	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Trappc6a-007	OTTMUST00000145394.1	435	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 6 Transcript length: 785 bps Translation length: 159 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS20905

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 25/08/2015 (Created on 09/01/2007)

Alternative symbols

AC149052.2-001

Other assemblies

This transcript maps to 19,508,712-19,516,145 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000002112

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: Trappc6a-001 OTTMUST00000052964.2

Summary

Transcript-based displays