Description
sorting nexin 17
Location
Chromosome 5: 31,193,290-31,198,780 forward strand.
About this transcript
This transcript has 15 exons.
Gene
This transcript is a product of gene OTTMUSG00000022491 Show transcript tableHide transcript table
Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
---|---|---|---|---|---|---|---|---|
Snx17-001 | OTTMUST00000053836.1 | 2018 | 470aa | OTTMUSP00000025620 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS19177 | Q8BVL3 | |
Snx17-006 | OTTMUST00000053841.3 | 765 | 169aa | OTTMUSP00000025622 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | D3Z7S9 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
Snx17-005 | OTTMUST00000053840.2 | 362 | 67aa | OTTMUSP00000025621 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | D3Z3J1 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
Snx17-010 | OTTMUST00000137247.1 | 1937 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
Snx17-011 | OTTMUST00000137246.1 | 1810 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
Snx17-002 | OTTMUST00000053837.2 | 2019 | 87aa | OTTMUSP00000062032 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | H3BKG9 | |
Snx17-003 | OTTMUST00000053838.2 | 1647 | 66aa | OTTMUSP00000062033 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | H3BKQ6 | |
Snx17-009 | OTTMUST00000053844.1 | 764 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
Snx17-004 | OTTMUST00000053839.1 | 2332 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
Snx17-012 | OTTMUST00000137470.1 | 2111 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
Snx17-008 | OTTMUST00000053843.1 | 786 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
Snx17-007 | OTTMUST00000053842.1 | 731 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
Snx17-013 | OTTMUST00000137471.1 | 641 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |