Transcript: Gpc2-005 OTTMUST00000054771.1

Description

glypican 2 (cerebroglycan)

Location

About this transcript

This transcript has 8 exons.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt
Gpc2-001	OTTMUST00000054647.2	2586	579aa	OTTMUSP00000026101	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS19799	Q8BKV1
Gpc2-004	OTTMUST00000054770.1	2514	570aa	OTTMUSP00000026167	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	F8WHY9
Gpc2-002	OTTMUST00000054768.2	2583	342aa	OTTMUSP00000063277	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	M0QWK4
Gpc2-008	OTTMUST00000054774.1	901	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Gpc2-003	OTTMUST00000054769.1	4252	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Gpc2-005	OTTMUST00000054771.1	3281	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Gpc2-006	OTTMUST00000054772.1	1574	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 8 Transcript length: 3,281 bps

Class

retained intron [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 10/03/2012 (Created on 31/01/2007)

Alternative symbols

AC159257.8-005

Remarks

Non canonical acceptor splice site between exons 4 and 5 of this variant AC159257.8-005

Other assemblies

This transcript maps to 138,273,657-138,279,962 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000159689

Curation Method

Manual annotation from Havana